STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Athe_0040PFAM: ABC-2 type transporter; KEGG: csc:Csac_0700 ABC-2 type transporter. (313 aa)    
Predicted Functional Partners:
Athe_0039
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_0699 ABC transporter related.
 
 
 0.970
Athe_0038
KEGG: csc:Csac_0698 hypothetical protein.
 
     0.959
Athe_0041
KEGG: csc:Csac_0701 hypothetical protein.
 
     0.943
Athe_0044
SMART: von Willebrand factor type A; KEGG: csc:Csac_0704 hypothetical protein.
 
     0.929
Athe_0045
PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: csc:Csac_0705 von Willebrand factor, type A.
 
     0.911
Athe_0043
KEGG: csc:Csac_0703 hypothetical protein.
 
     0.869
Athe_0178
KEGG: csc:Csac_2415 hypothetical protein.
 
 
 0.813
Athe_0042
PFAM: ATPase associated with various cellular activities AAA_3; magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: csc:Csac_0702 ATPase.
 
    0.796
Athe_0047
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: csc:Csac_2577 ABC transporter, transmembrane region.
  
 
 0.663
Athe_0117
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_2498 ABC transporter related.
  
 
 0.561
Your Current Organism:
Caldicellulosiruptor bescii
NCBI taxonomy Id: 521460
Other names: Anaerocellum thermophilum DSM 6725, C. bescii DSM 6725, Caldicellulosiruptor becscii str. DSM 6725, Caldicellulosiruptor bescii DSM 6725, Caldicellulosiruptor bescii strain DSM 6725
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.