STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Athe_0449PFAM: protein of unknown function DUF58; KEGG: csc:Csac_0672 hypothetical protein. (381 aa)    
Predicted Functional Partners:
Athe_2560
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: csc:Csac_0291 ATPase.
 
  
 0.708
Athe_0042
PFAM: ATPase associated with various cellular activities AAA_3; magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: csc:Csac_0702 ATPase.
 
  
 0.588
Athe_0342
PFAM: major facilitator superfamily MFS_1; KEGG: csc:Csac_1170 major facilitator transporter.
  
     0.578
Athe_2571
PFAM: transglutaminase domain protein; SMART: Hedgehog/intein hint domain protein; KEGG: csc:Csac_0279 hypothetical protein.
 
  
 0.492
Athe_0045
PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: csc:Csac_0705 von Willebrand factor, type A.
 
     0.462
Athe_2558
KEGG: csc:Csac_0293 hypothetical protein.
  
     0.452
Athe_1067
PFAM: major facilitator superfamily MFS_1; KEGG: csc:Csac_1517 major facilitator transporter.
  
     0.446
Athe_1246
KEGG: csc:Csac_1811 hypothetical protein.
  
     0.425
Your Current Organism:
Caldicellulosiruptor bescii
NCBI taxonomy Id: 521460
Other names: Anaerocellum thermophilum DSM 6725, C. bescii DSM 6725, Caldicellulosiruptor becscii str. DSM 6725, Caldicellulosiruptor bescii DSM 6725, Caldicellulosiruptor bescii strain DSM 6725
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.