STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Athe_0748PFAM: protein of unknown function DUF402; KEGG: csc:Csac_0897 hypothetical protein. (154 aa)    
Predicted Functional Partners:
Athe_0749
PFAM: dihydropteroate synthase DHPS; KEGG: csc:Csac_0898 dihydropteroate synthase, DhpS.
       0.771
Athe_2571
PFAM: transglutaminase domain protein; SMART: Hedgehog/intein hint domain protein; KEGG: csc:Csac_0279 hypothetical protein.
  
     0.693
Athe_2603
TIGRFAM: regulatory protein, FmdB family; KEGG: csc:Csac_0535 FmdB family regulatory protein.
  
     0.693
Athe_0750
PFAM: protein of unknown function DUF512; KEGG: csc:Csac_0899 hypothetical protein.
       0.692
der
Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
       0.692
plsY-2
Protein of unknown function DUF205; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
       0.692
Athe_0753
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: csc:Csac_0902 methyltransferase type 12.
       0.692
Athe_2741
KEGG: csc:Csac_0013 hypothetical protein.
  
     0.681
Athe_2742
KEGG: csc:Csac_0012 hypothetical protein.
  
     0.675
Athe_2747
KEGG: csc:Csac_2760 hypothetical protein.
  
     0.651
Your Current Organism:
Caldicellulosiruptor bescii
NCBI taxonomy Id: 521460
Other names: Anaerocellum thermophilum DSM 6725, C. bescii DSM 6725, Caldicellulosiruptor becscii str. DSM 6725, Caldicellulosiruptor bescii DSM 6725, Caldicellulosiruptor bescii strain DSM 6725
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