STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Athe_0834KEGG: csc:Csac_0982 hypothetical protein. (170 aa)    
Predicted Functional Partners:
Athe_1421
KEGG: csc:Csac_1967 hypothetical protein.
 
     0.830
Athe_0833
MCP methyltransferase, CheR-type; KEGG: csc:Csac_0981 protein-glutamate O-methyltransferase; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type.
       0.782
Athe_0835
PFAM: glycosyl transferase family 4; KEGG: csc:Csac_0983 glycosyl transferase family protein.
       0.782
Athe_1420
PFAM: heat shock protein DnaJ domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: heat shock protein DnaJ domain protein; KEGG: csc:Csac_1966 heat shock protein DnaJ domain-containing protein.
 
    0.742
Athe_1196
KEGG: csc:Csac_1650 precorrin-2 dehydrogenase.
  
     0.718
Athe_0832
PFAM: GCN5-related N-acetyltransferase; KEGG: csc:Csac_0980 GCN5-related N-acetyltransferase.
       0.702
Athe_0528
KEGG: csc:Csac_0754 hypothetical protein.
  
     0.693
Athe_2045
TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: csc:Csac_1366 primosome, DnaD subunit.
  
     0.643
Athe_1766
KEGG: csc:Csac_2313 hypothetical protein.
  
     0.633
Athe_0836
KEGG: csc:Csac_0984 hypothetical protein.
       0.517
Your Current Organism:
Caldicellulosiruptor bescii
NCBI taxonomy Id: 521460
Other names: Anaerocellum thermophilum DSM 6725, C. bescii DSM 6725, Caldicellulosiruptor becscii str. DSM 6725, Caldicellulosiruptor bescii DSM 6725, Caldicellulosiruptor bescii strain DSM 6725
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.