STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Athe_0847PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_2696 ABC-type sugar transport system periplasmic component-like protein. (556 aa)    
Predicted Functional Partners:
Athe_0851
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2692 binding-protein-dependent transport systems inner membrane component.
 
   0.845
Athe_2552
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_0299 binding-protein-dependent transport systems inner membrane component.
  
   0.823
Athe_2053
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_1358 binding-protein-dependent transport systems inner membrane component.
  
   0.808
Athe_0850
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2693 binding-protein-dependent transport systems inner membrane component.
 
  
 0.771
Athe_2054
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_1357 binding-protein-dependent transport systems inner membrane component.
 
  
 0.722
Athe_2553
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_0298 binding-protein-dependent transport systems inner membrane component.
 
  
 0.697
Athe_1803
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: csc:Csac_2346 ABC transporter related.
  
 
 0.659
Athe_2558
KEGG: csc:Csac_0293 hypothetical protein.
  
     0.657
Athe_0086
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2553 binding-protein-dependent transport systems inner membrane component.
  
   0.627
Athe_0607
PFAM: Ig domain protein; KEGG: dth:DICTH_0703 arabinogalactan endo-1,4-beta-galactosidase, putative.
  
    0.626
Your Current Organism:
Caldicellulosiruptor bescii
NCBI taxonomy Id: 521460
Other names: Anaerocellum thermophilum DSM 6725, C. bescii DSM 6725, Caldicellulosiruptor becscii str. DSM 6725, Caldicellulosiruptor bescii DSM 6725, Caldicellulosiruptor bescii strain DSM 6725
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.