STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Athe_0890PFAM: MMPL domain protein; KEGG: csc:Csac_1474 MmpL domain-containing protein. (1026 aa)    
Predicted Functional Partners:
Athe_1045
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: csc:Csac_2076 protein kinase.
   
 
 0.672
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
    
 
 0.563
Athe_0715
KEGG: csc:Csac_0885 hypothetical protein.
  
 
   0.558
Athe_1863
KEGG: csc:Csac_1082 hypothetical protein.
  
     0.493
Athe_2347
KEGG: csc:Csac_0145 hypothetical protein.
  
   
 0.469
Athe_2571
PFAM: transglutaminase domain protein; SMART: Hedgehog/intein hint domain protein; KEGG: csc:Csac_0279 hypothetical protein.
  
     0.468
Athe_0772
KEGG: csc:Csac_0919 stage V sporulation protein D; TIGRFAM: stage V sporulation protein D; PFAM: penicillin-binding protein transpeptidase; PASTA domain containing protein; Penicillin-binding protein dimerisation domain; SMART: PASTA domain containing protein.
   
 
 0.463
Athe_0038
KEGG: csc:Csac_0698 hypothetical protein.
  
 
 
 0.461
Athe_1944
PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: csc:Csac_1008 fibronectin, type III domain-containing protein.
  
     0.443
Athe_2572
KEGG: csc:Csac_0278 hypothetical protein.
  
     0.429
Your Current Organism:
Caldicellulosiruptor bescii
NCBI taxonomy Id: 521460
Other names: Anaerocellum thermophilum DSM 6725, C. bescii DSM 6725, Caldicellulosiruptor becscii str. DSM 6725, Caldicellulosiruptor bescii DSM 6725, Caldicellulosiruptor bescii strain DSM 6725
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.