STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Athe_2076PFAM: glycoside hydrolase family 2 sugar binding; KEGG: dth:DICTH_1894 hypothetical protein. (1039 aa)    
Predicted Functional Partners:
Athe_2078
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: tma:TM0425 oxidoreductase, putative.
 
     0.840
Athe_2077
PFAM: lipolytic protein G-D-S-L family; KEGG: mtp:Mthe_0191 GDSL family lipase.
  
   0.726
Athe_2091
PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU07100 lipoprotein.
  
     0.711
Athe_2682
KEGG: csc:Csac_0044 hypothetical protein.
  
     0.666
Athe_0674
KEGG: cbe:Cbei_0281 hypothetical protein.
  
     0.623
Athe_0204
PFAM: protein of unknown function DUF296; KEGG: dth:DICTH_0698 hypothetical DNA binding protein.
  
     0.620
Athe_1582
PFAM: protein of unknown function DUF214; KEGG: dth:DICTH_0122 ABC transporter, permease protein.
  
     0.588
Athe_2335
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: csc:Csac_0598 xylose isomerase domain-containing protein.
  
     0.585
Athe_0342
PFAM: major facilitator superfamily MFS_1; KEGG: csc:Csac_1170 major facilitator transporter.
  
     0.546
Athe_2075
KEGG: csc:Csac_1822 hypothetical protein.
       0.497
Your Current Organism:
Caldicellulosiruptor bescii
NCBI taxonomy Id: 521460
Other names: Anaerocellum thermophilum DSM 6725, C. bescii DSM 6725, Caldicellulosiruptor becscii str. DSM 6725, Caldicellulosiruptor bescii DSM 6725, Caldicellulosiruptor bescii strain DSM 6725
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.