STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Athe_2080PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0317 lactose transport system. (308 aa)    
Predicted Functional Partners:
Athe_2079
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU06990 hypothetical protein.
 
 0.971
Athe_1803
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: csc:Csac_2346 ABC transporter related.
 
 
 0.947
Athe_2577
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_0428 binding-protein-dependent transport systems inner membrane component.
 
 0.947
Athe_2081
PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU06970 hypothetical protein.
 
 
 0.914
Athe_2374
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpy:Cphy_0621 binding-protein-dependent transport systems inner membrane component.
 
 
 0.878
Athe_0180
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2413 binding-protein-dependent transport systems inner membrane component.
 
 
 0.877
Athe_0616
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_0694 binding-protein-dependent transport systems inner membrane component.
 
 
 0.876
Athe_0401
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_0442 binding-protein-dependent transport systems inner membrane component.
 
 
 0.875
Athe_0176
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2417 binding-protein-dependent transport systems inner membrane component.
 
 
 0.864
Athe_2308
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2491 binding-protein-dependent transport systems inner membrane component.
 
 
 0.857
Your Current Organism:
Caldicellulosiruptor bescii
NCBI taxonomy Id: 521460
Other names: Anaerocellum thermophilum DSM 6725, C. bescii DSM 6725, Caldicellulosiruptor becscii str. DSM 6725, Caldicellulosiruptor bescii DSM 6725, Caldicellulosiruptor bescii strain DSM 6725
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.