STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Athe_2148PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: csc:Csac_1282 putative CheW protein. (140 aa)    
Predicted Functional Partners:
Athe_2149
CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; CheW domain protein; P2 response regulator binding domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; KEGG: csc:Csac_1281 CheA signal transduction histidine kinase.
 
 0.996
Athe_0577
Putative CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Signal transducing histidine kinase homodimeric; SMART: CheW domain protein; ATP-binding region ATPase domain protein; KEGG: csc:Csac_0814 putative CheA signal transduction histidine kinase.
 
 0.989
Athe_1770
CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; P2 response regulator binding domain protein; SMART: ATP-binding region ATPase domain protein; CheW domain protein; Hpt domain protein; KEGG: csc:Csac_0809 CheA signal transduction histidine kinase.
 
 0.989
Athe_2230
CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; SMART: ATP-binding region ATPase domain protein; Hpt domain protein; CheW domain protein; KEGG: tye:THEYE_A2067 CheA.
 
 0.989
cheD
CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
  
 0.965
Athe_0206
PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: csc:Csac_0415 methyl-accepting chemotaxis sensory transducer.
 
 0.963
Athe_1768
PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: cbe:Cbei_4828 methyl-accepting chemotaxis sensory transducer.
 
 0.963
Athe_2304
PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: csc:Csac_2452 methyl-accepting chemotaxis sensory transducer.
 
 0.963
Athe_1130
PFAM: Cache type 2 domain protein; chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: tpt:Tpet_1365 methyl-accepting chemotaxis sensory transducer.
 
 0.962
Athe_2237
PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: tte:TTE1033 methyl-accepting chemotaxis protein.
 
 0.961
Your Current Organism:
Caldicellulosiruptor bescii
NCBI taxonomy Id: 521460
Other names: Anaerocellum thermophilum DSM 6725, C. bescii DSM 6725, Caldicellulosiruptor becscii str. DSM 6725, Caldicellulosiruptor bescii DSM 6725, Caldicellulosiruptor bescii strain DSM 6725
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