STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Athe_2233Hypothetical protein; KEGG: cbt:CLH_2698 putative chemotaxis sensory transduction protein. (157 aa)    
Predicted Functional Partners:
Athe_2230
CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; SMART: ATP-binding region ATPase domain protein; Hpt domain protein; CheW domain protein; KEGG: tye:THEYE_A2067 CheA.
  
 
 0.974
Athe_2740
KEGG: csc:Csac_0020 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; extracellular solute-binding protein family 3; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; extracellular solute-binding protein family 3; PAS domain containing protein.
  
 
 0.973
Athe_2232
PFAM: CheC domain protein; KEGG: swo:Swol_1446 CheX protein (uncharacterized ORF in chemotaxis operon).
   
 
 0.952
Athe_2236
PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: swo:Swol_1450 chemotaxis signal transduction protein.
  
 
 0.913
Athe_2160
CheC, inhibitor of MCP methylation / FliN fusion protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; KEGG: csc:Csac_1270 flagellar motor switch protein.
  
  
 0.907
Athe_2161
TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; KEGG: csc:Csac_1269 flagellar motor switch protein FliM.
  
 
 0.906
Athe_0577
Putative CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Signal transducing histidine kinase homodimeric; SMART: CheW domain protein; ATP-binding region ATPase domain protein; KEGG: csc:Csac_0814 putative CheA signal transduction histidine kinase.
  
 
 0.892
Athe_0581
PFAM: CheW domain protein; Hpt domain protein; SMART: Hpt domain protein; CheW domain protein; KEGG: csc:Csac_0818 putative CheW protein.
  
 
 0.892
Athe_1770
CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; P2 response regulator binding domain protein; SMART: ATP-binding region ATPase domain protein; CheW domain protein; Hpt domain protein; KEGG: csc:Csac_0809 CheA signal transduction histidine kinase.
  
 
 0.892
Athe_2149
CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; CheW domain protein; P2 response regulator binding domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; KEGG: csc:Csac_1281 CheA signal transduction histidine kinase.
  
 
 0.892
Your Current Organism:
Caldicellulosiruptor bescii
NCBI taxonomy Id: 521460
Other names: Anaerocellum thermophilum DSM 6725, C. bescii DSM 6725, Caldicellulosiruptor becscii str. DSM 6725, Caldicellulosiruptor bescii DSM 6725, Caldicellulosiruptor bescii strain DSM 6725
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