STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Athe_2450KEGG: csc:Csac_1431 hypothetical protein. (176 aa)    
Predicted Functional Partners:
Athe_2451
PFAM: type II secretion system protein; KEGG: csc:Csac_1430 type II secretion system protein.
       0.782
Athe_2452
PFAM: type II secretion system protein; KEGG: csc:Csac_1429 type II secretion system protein.
       0.782
Athe_2453
PFAM: type II secretion system protein E; KEGG: csc:Csac_1428 type II secretion system protein E.
       0.781
Athe_2454
KEGG: csc:Csac_1427 ATPase involved in chromosome partitioning-like protein.
       0.781
Athe_2455
KEGG: csc:Csac_1426 hypothetical protein.
       0.750
Athe_2457
PFAM: peptidase A24A prepilin type IV; KEGG: csc:Csac_1423 peptidase A24A, prepilin type IV.
       0.712
Athe_2458
KEGG: csc:Csac_1422 ATPase involved in chromosome partitioning-like protein.
       0.712
Athe_2456
KEGG: csc:Csac_1425 hypothetical protein.
       0.711
Athe_2459
KEGG: csc:Csac_1421 hypothetical protein.
       0.711
Athe_2449
KEGG: csc:Csac_1432 hypothetical protein.
       0.697
Your Current Organism:
Caldicellulosiruptor bescii
NCBI taxonomy Id: 521460
Other names: Anaerocellum thermophilum DSM 6725, C. bescii DSM 6725, Caldicellulosiruptor becscii str. DSM 6725, Caldicellulosiruptor bescii DSM 6725, Caldicellulosiruptor bescii strain DSM 6725
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.