Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Plim_0513Hypothetical protein; KEGG: amc:MADE_03505 possible biopolymer transport protein, ExbB family. (507 aa)    
Predicted Functional Partners:
Plim_4208
Tetratricopeptide TPR_2 repeat protein.
  
    0.698
Plim_0931
PFAM: Protein of unknown function DUF1592; Protein of unknown function DUF1588; Protein of unknown function DUF1587; Protein of unknown function DUF1595; protein of unknown function DUF1585; KEGG: sus:Acid_2097 hypothetical protein.
  
     0.692
Plim_0946
PFAM: protein of unknown function DUF1552; KEGG: sus:Acid_2098 hypothetical protein.
  
     0.689
Plim_0568
PFAM: Protein of unknown function DUF1592; Protein of unknown function DUF1588; Protein of unknown function DUF1587; Planctomycete cytochrome C; Protein of unknown function DUF1595; protein of unknown function DUF1585; KEGG: sus:Acid_4307 hypothetical protein.
  
     0.646
Plim_0569
PFAM: protein of unknown function DUF1552; KEGG: sus:Acid_0842 hypothetical protein.
  
     0.646
Plim_4083
Protein of unknown function DUF1559.
  
     0.638
Plim_4016
PDZ/DHR/GLGF domain protein.
  
     0.625
Plim_2339
PFAM: FMN-binding domain protein; KEGG: sse:Ssed_2105 hypothetical protein.
  
    0.621
Plim_1153
TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; KEGG: sus:Acid_3123 putative heme-binding protein.
  
     0.620
Plim_0839
ATPase-like protein involved in DNA repair; KEGG: liver stage antigen.
  
     0.616
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.