Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Plim_0569PFAM: protein of unknown function DUF1552; KEGG: sus:Acid_0842 hypothetical protein. (452 aa)    
Predicted Functional Partners:
Plim_0568
PFAM: Protein of unknown function DUF1592; Protein of unknown function DUF1588; Protein of unknown function DUF1587; Planctomycete cytochrome C; Protein of unknown function DUF1595; protein of unknown function DUF1585; KEGG: sus:Acid_4307 hypothetical protein.
 
     0.900
Plim_0931
PFAM: Protein of unknown function DUF1592; Protein of unknown function DUF1588; Protein of unknown function DUF1587; Protein of unknown function DUF1595; protein of unknown function DUF1585; KEGG: sus:Acid_2097 hypothetical protein.
 
     0.775
Plim_2485
PFAM: Protein of unknown function DUF1588; PA14 domain protein; Protein of unknown function DUF1592; SMART: PA14 domain protein; KEGG: scl:sce1022 hypothetical protein.
  
     0.769
Plim_3241
Protein of unknown function DUF1588; KEGG: proteophosphoglycan 5.
 
     0.766
Plim_0287
PFAM: Protein of unknown function DUF1592; Protein of unknown function DUF1588; Protein of unknown function DUF1587; Protein of unknown function DUF1595; protein of unknown function DUF1585; KEGG: sus:Acid_4307 hypothetical protein.
  
     0.765
Plim_0129
PFAM: Protein of unknown function DUF1592; Protein of unknown function DUF1588; Protein of unknown function DUF1587; Protein of unknown function DUF1595; protein of unknown function DUF1585; KEGG: sus:Acid_5827 hypothetical protein.
 
     0.762
Plim_1449
KEGG: sus:Acid_5040 hypothetical protein.
  
     0.729
Plim_3787
Hypothetical protein.
  
     0.724
Plim_1450
PFAM: protein of unknown function DUF1549; KEGG: sus:Acid_5039 hypothetical protein.
  
     0.722
Plim_1151
PFAM: protein of unknown function DUF1549; WD-40 repeat protein; SMART: WD-40 repeat protein; KEGG: sus:Acid_5709 hypothetical protein.
  
     0.707
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.