Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Plim_0637PFAM: glycosyl transferase group 1; KEGG: noc:Noc_2479 glycosyl transferase, group 1. (383 aa)    
Predicted Functional Partners:
Plim_0635
PFAM: glycosyl transferase group 1; KEGG: sat:SYN_02667 alpha-D-QuiNAc alpha-1,3- galactosyltransferase.
     0.954
Plim_0636
PFAM: Methyltransferase type 11; KEGG: mca:MCA2546 hypothetical protein.
 
     0.799
Plim_3477
Glycosyl transferase group 1.
 
     0.784
Plim_1266
PFAM: glycosyl transferase group 1; KEGG: nar:Saro_3069 glycosyl transferase, group 1.
 
     0.753
Plim_4196
Glycosyl transferase group 1.
  
     0.724
Plim_1056
PFAM: glycosyl transferase group 1; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: acp:A2cp1_4300 phosphatidylinositol alpha- mannosyltransferase.
  
     0.723
Plim_0633
Undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; KEGG: pna:Pnap_3481 sugar transferase.
 
    0.670
Plim_0639
PFAM: polysaccharide biosynthesis protein; KEGG: oan:Oant_1020 polysaccharide biosynthesis protein.
  
    0.669
Plim_0634
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short- chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: sat:SYN_02668 UDP-glucose 4-epimerase.
  
    0.667
Plim_2615
Asparagine synthase (glutamine-hydrolyzing).
  
     0.649
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
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