Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Plim_0670KEGG: noc:Noc_0152 secretion protein HlyD. (516 aa)    
Predicted Functional Partners:
Plim_0669
TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: scl:sce8113 cation efflux system protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.888
Plim_3312
4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
     0.764
Plim_3626
Xylose isomerase domain protein TIM barrel; KEGG: similar to splicing coactivator subunit SRm300.
  
     0.746
Plim_1863
SMART: Pyrrolo-quinoline quinone; KEGG: pla:Plav_3493 pyrrolo-quinoline quinone.
  
     0.742
Plim_4190
NolW domain protein; KEGG: similar to ELKS/RAB6-interacting/CAST family member 2.
  
     0.737
Plim_2915
Protein of unknown function DUF116.
  
     0.728
Plim_1805
Hypothetical protein.
  
     0.725
Plim_4016
PDZ/DHR/GLGF domain protein.
  
     0.705
mraZ-2
Protein of unknown function UPF0040; Belongs to the MraZ family.
  
     0.704
Plim_0982
PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone; KEGG: acr:Acry_1741 pyrrolo-quinoline quinone.
  
     0.689
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.