STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Plim_0708PFAM: putative esterase; KEGG: sus:Acid_2103 putative esterase. (285 aa)    
Predicted Functional Partners:
Plim_0707
PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: lch:Lcho_1828 MarR family transcriptional regulator.
 
     0.731
Plim_1924
Pectin acetylesterase; KEGG: sus:Acid_1173 alpha/beta hydrolase.
 
     0.652
Plim_2905
Xylanase.
 
     0.642
Plim_3030
Dipeptidyl-peptidase IV.
  
     0.635
Plim_2550
PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; metalloenzyme domain protein; KEGG: hch:HCH_03222 hemopexin repeat-containing protein.
  
     0.473
Plim_1790
PFAM: metallophosphoesterase; KEGG: mxa:MXAN_2579 metallophosphoesterase/PKD domain protein.
  
     0.423
Plim_2636
Sialate O-acetylesterase.
  
     0.419
Plim_1707
KEGG: sus:Acid_4741 hypothetical protein.
  
     0.407
Plim_3314
Hypothetical protein.
  
     0.403
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.