STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Plim_0773Phosphonopyruvate decarboxylase-related protein; KEGG: sat:SYN_02641 cofactor-independent phosphoglycerate mutase; TIGRFAM: phosphonopyruvate decarboxylase-related protein; PFAM: metalloenzyme domain protein. (402 aa)    
Predicted Functional Partners:
Plim_1680
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: rec:RHECIAT_CH0002310 putative phosphoglycerate dehydrogenase protein.
  
  
  0.928
Plim_0308
Proposed homoserine kinase; KEGG: pca:Pcar_1514 cofactor-independent phosphoglycerate mutase; TIGRFAM: proposed homoserine kinase; phosphonopyruvate decarboxylase-related protein; PFAM: metalloenzyme domain protein.
  
  
 
0.927
pgk
PFAM: phosphoglycerate kinase; KEGG: hypothetical protein; K00927 phosphoglycerate kinase.
    
 0.911
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
     
 0.907
Plim_1831
Glycerate kinase; PFAM: MOFRL domain protein; KEGG: dvu:DVU0765 hydroxypyruvate reductase, putative.
     
  0.900
Plim_2827
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
  0.900
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
     
 0.815
Plim_0338
PFAM: Transketolase central region; Transketolase domain protein; KEGG: sus:Acid_2452 transketolase subunit B.
     
  0.800
Plim_0339
PFAM: Transketolase domain protein; KEGG: gur:Gura_0491 transketolase domain-containing protein.
     
  0.800
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
     
  0.800
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
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