STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plim_0803PFAM: aldo/keto reductase; KEGG: pfo:Pfl01_0252 aldo/keto reductase. (337 aa)    
Predicted Functional Partners:
Plim_1959
PFAM: aldo/keto reductase; KEGG: ppf:Pput_4804 aldo/keto reductase.
  
     0.562
Plim_0800
Hypothetical protein.
       0.561
Plim_0801
Hypothetical protein.
       0.561
Plim_0802
Hypothetical protein.
       0.561
Plim_1895
TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: bca:BCE_A0165 MIP family channel protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 
 0.549
Plim_0804
PFAM: intradiol ring-cleavage dioxygenase; KEGG: pmy:Pmen_0474 intradiol ring-cleavage dioxygenase.
       0.497
Plim_0799
Hypothetical protein; KEGG: pzu:PHZ_c2267 permease of the major facilitator superfamily.
       0.408
Plim_2369
PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; SMART: phospholipid/glycerol acyltransferase; KEGG: aba:Acid345_4052 2-acyl-glycerophospho- ethanolamine acyltransferase.
  
 0.408
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
Server load: high (92%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.