rpsT protein (Planctopirus limnophila) - STRING interaction network

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rpsT

Ribosomal protein S20; Binds directly to 16S ribosomal RNA. (104 aa)

Predicted Functional Partners:

rplU

0.989

rpmB

0.989

rpmF

0.989

rplM

0.989

rpsO

0.988

rpmE2

0.988

rpsP

0.987

rpmA

0.987

rpsU

0.987

rpsI

0.987

Your Current Organism:

Planctopirus limnophila

NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplU	Plim_2877	Plim_0356	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.990
rplM	rpmA	Plim_2877	Plim_0238	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; KEGG: bbk:BARBAKC583_0310 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.993
rplM	rpmB	Plim_2877	Plim_2279	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	TIGRFAM: ribosomal protein L28; KEGG: dvu:DVU1211 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.988
rplM	rpmE2	Plim_2877	Plim_0923	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; KEGG: bph:Bphy_0947 ribosomal protein L31.	0.981
rplM	rpmF	Plim_2877	Plim_2568	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.988
rplM	rpsI	Plim_2877	Plim_2878	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.998
rplM	rpsO	Plim_2877	Plim_0379	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.995
rplM	rpsP	Plim_2877	Plim_0180	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: amc:MADE_01705 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.989
rplM	rpsT	Plim_2877	Plim_0856	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.989
rplM	rpsU	Plim_2877	Plim_0852	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; KEGG: mxa:MXAN_5201 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.985
rplU	rplM	Plim_0356	Plim_2877	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.990
rplU	rpmA	Plim_0356	Plim_0238	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; KEGG: bbk:BARBAKC583_0310 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.994
rplU	rpmB	Plim_0356	Plim_2279	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	TIGRFAM: ribosomal protein L28; KEGG: dvu:DVU1211 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.989
rplU	rpmE2	Plim_0356	Plim_0923	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; KEGG: bph:Bphy_0947 ribosomal protein L31.	0.985
rplU	rpmF	Plim_0356	Plim_2568	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.992
rplU	rpsI	Plim_0356	Plim_2878	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.989
rplU	rpsO	Plim_0356	Plim_0379	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.987
rplU	rpsP	Plim_0356	Plim_0180	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: amc:MADE_01705 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.988
rplU	rpsT	Plim_0356	Plim_0856	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.989
rplU	rpsU	Plim_0356	Plim_0852	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; KEGG: mxa:MXAN_5201 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.988

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