STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Plim_1004PFAM: protein of unknown function DUF323; KEGG: mag:amb1714 hypothetical protein. (298 aa)    
Predicted Functional Partners:
Plim_0821
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: bcr:BCAH187_A3910 serine/threonine protein kinase.
 
 
    0.828
Plim_2753
Serine/threonine protein kinase-related protein.
 
 
    0.794
Plim_4042
Serine/threonine protein kinase-related protein.
 
 
    0.789
Plim_0142
PFAM: protein of unknown function DUF323; KEGG: scl:sce6068 protein kinase.
  
     0.775
Plim_2492
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: azo:azo3774 putative serine/threonine protein kinase.
 
 
    0.565
Plim_3452
Hypothetical protein.
 
 
    0.471
Plim_3104
Serine/threonine protein kinase-related protein.
 
 
    0.460
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.