Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Plim_1396PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_6003 ABC transporter, ATP-binding protein. (331 aa)    
Predicted Functional Partners:
Plim_3531
Protein of unknown function DUF990.
 
  
 0.872
Plim_0739
PFAM: protein of unknown function DUF990; KEGG: mxa:MXAN_6001 hypothetical protein.
 
  
 0.855
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
    
   0.801
Plim_3482
ABC transporter related protein.
 
    
0.790
cysA
Sulfate ABC transporter, ATPase subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
     
0.667
Plim_2309
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bba:Bd3388 branched-chain amino acid transport system.
 
     
0.628
Plim_1397
KEGG: hypothetical protein.
       0.574
Plim_1395
PFAM: fumarate lyase; KEGG: pap:PSPA7_6217 aspartate ammonia-lyase.
       0.536
Plim_0470
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_0166 ABC transporter related.
 
    
0.418
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
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