Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Plim_1530TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: ade:Adeh_2218 ammonium transporter. (512 aa)    
Predicted Functional Partners:
Plim_2274
PFAM: nitrogen regulatory protein P-II; KEGG: cak:Caul_2852 nitrogen regulatory protein P- II; Belongs to the P(II) protein family.
 
 0.989
Plim_2273
PFAM: nitrogen regulatory protein P-II; KEGG: ppd:Ppro_1680 nitrogen regulatory protein P- II; Belongs to the P(II) protein family.
 
 0.980
Plim_3695
Conserved hypothetical protein.
  
 
 0.815
Plim_2694
Glutamate synthase (NADH).
 
  
 0.706
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
     
 0.462
Plim_1531
Hypothetical protein.
       0.441
Plim_1529
KEGG: scl:sce6783 hypothetical protein.
       0.423
Plim_1395
PFAM: fumarate lyase; KEGG: pap:PSPA7_6217 aspartate ammonia-lyase.
   
  
 0.402
Plim_0683
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: afw:Anae109_4400 glutamine synthetase, type I.
  
  
 0.401
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.