STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plim_1560KEGG: azo:azo0386 hypothetical protein. (416 aa)    
Predicted Functional Partners:
Plim_2316
Hypothetical protein; KEGG: nmu:Nmul_A0278 glycosyl transferase family protein.
  
     0.769
Plim_0336
Hypothetical protein; KEGG: sat:SYN_00815 dolichyl-phosphate-mannose- protein mannosyltransferase proteins.
  
     0.717
Plim_0394
KEGG: mno:Mnod_7207 hypothetical protein.
  
    0.668
Plim_1011
Hypothetical protein; KEGG: hne:HNE_2881 alpha/beta fold family hydrolase.
  
     0.661
Plim_3516
Hypothetical protein.
  
     0.576
Plim_0255
Hypothetical protein.
  
     0.573
Plim_1561
Hypothetical protein.
       0.563
Plim_2436
PFAM: O-antigen polymerase; KEGG: spe:Spro_4678 O-antigen polymerase.
  
     0.560
Plim_3249
Hypothetical protein.
  
     0.546
Plim_0189
KEGG: ppd:Ppro_2695 hypothetical protein.
  
     0.545
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.