Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Plim_1749KEGG: hypothetical LOC798921. (286 aa)    
Predicted Functional Partners:
Plim_1748
Hypothetical protein; KEGG: sus:Acid_0323 ethanolamine utilization protein EutN/carboxysome structural protein CcmL.
       0.817
Plim_1747
PFAM: class II aldolase/adducin family protein; KEGG: sus:Acid_1334 class II aldolase/adducin family protein.
       0.665
Plim_1750
PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: sus:Acid_0324 ethanolamine utilization protein EutN/carboxysome structural protein CcmL.
       0.637
Plim_1751
PFAM: Aldehyde Dehydrogenase; KEGG: sus:Acid_1333 aldehyde dehydrogenase.
       0.504
Plim_1746
PFAM: Lactate/malate dehydrogenase; KEGG: aba:Acid345_1483 malate dehydrogenase (NAD); Belongs to the LDH/MDH superfamily.
       0.480
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.