Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Plim_1791PFAM: NHL repeat containing protein; KEGG: sus:Acid_1144 NHL repeat-containing protein. (425 aa)    
Predicted Functional Partners:
Plim_1987
KEGG: sus:Acid_5332 hypothetical protein.
  
     0.573
Plim_0883
KEGG: sus:Acid_5331 hypothetical protein.
  
     0.536
Plim_2156
KEGG: sus:Acid_4453 transmembrane prediction; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
     0.528
Plim_1151
PFAM: protein of unknown function DUF1549; WD-40 repeat protein; SMART: WD-40 repeat protein; KEGG: sus:Acid_5709 hypothetical protein.
  
     0.507
Plim_1790
PFAM: metallophosphoesterase; KEGG: mxa:MXAN_2579 metallophosphoesterase/PKD domain protein.
       0.491
Plim_2090
PFAM: protein of unknown function DUF1549; KEGG: sus:Acid_5709 hypothetical protein.
  
   0.490
Plim_1726
Hypothetical protein; KEGG: sus:Acid_7102 putative xylan esterase.
  
     0.464
Plim_3241
Protein of unknown function DUF1588; KEGG: proteophosphoglycan 5.
  
     0.461
Plim_0713
PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; sulfatase; KEGG: sus:Acid_3473 type I phosphodiesterase/nucleotide pyrophosphatase.
  
     0.442
Plim_1150
PFAM: protein of unknown function DUF1501; KEGG: sus:Acid_5708 hypothetical protein.
  
     0.435
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.