STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plim_1802PFAM: protein of unknown function DUF58; SMART: von Willebrand factor type A; KEGG: mxa:MXAN_6611 hypothetical protein. (303 aa)    
Predicted Functional Partners:
Plim_1801
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: acp:A2cp1_4423 ATPase associated with various cellular activities AAA_3.
 
    0.943
Plim_1803
TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF1550; KEGG: afw:Anae109_4420 hypothetical protein.
 
     0.866
Plim_1804
KEGG: sus:Acid_6438 hypothetical protein.
 
     0.805
Plim_2312
TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF1550; KEGG: afw:Anae109_4420 hypothetical protein.
  
    0.765
Plim_3635
Conserved hypothetical protein.
 
    0.763
Plim_0838
PFAM: protein of unknown function DUF1355; KEGG: sus:Acid_6438 hypothetical protein.
 
     0.755
Plim_1689
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: ade:Adeh_4268 ATPase associated with various cellular activities, AAA-3.
  
    0.686
Plim_0306
PFAM: A-macroglobulin complement component; KEGG: mxa:MXAN_5864 hypothetical protein.
 
    0.664
Plim_2313
KEGG: mxa:MXAN_5863 hypothetical protein.
  
     0.663
Plim_2774
ATPase associated with various cellular activities AAA_3.
  
    0.660
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.