Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
Plim_1922Dipeptidyl aminopeptidase/acylaminoacyl- peptidase-like protein; KEGG: hch:HCH_01563 esterase/lipase. (347 aa)    
Predicted Functional Partners:
Plim_1434
Esterase/lipase-like protein; KEGG: bra:BRADO1504 putative para-nitrobenzyl esterase.
  
     0.773
Plim_3171
Esterase/lipase-like protein.
  
     0.769
Plim_2623
Alpha/beta hydrolase fold-3 domain protein.
  
     0.719
Plim_1924
Pectin acetylesterase; KEGG: sus:Acid_1173 alpha/beta hydrolase.
 
     0.632
Plim_2905
Xylanase.
  
     0.583
Plim_1923
PFAM: protein of unknown function DUF606; KEGG: rme:Rmet_5246 protein of unknown function DUF606.
       0.437
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
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