STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Plim_2085PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: mxa:MXAN_3419 sensor histidine kinase. (510 aa)    
Predicted Functional Partners:
Plim_2180
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: wpi:WPa_0358 response regulator/GGDEF domain protein.
 
 
 
 0.877
Plim_3367
Response regulator receiver.
 
 
 
 0.799
Plim_3722
Response regulator receiver.
  
 
 
 0.797
Plim_2264
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: mlo:mlr6691 two-component response regulator.
  
 
 
 0.795
Plim_2544
KEGG: dal:Dalk_2555 response regulator receiver protein; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: response regulator receiver; SMART: response regulator receiver.
  
 
 
 0.794
Plim_1485
PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sfu:Sfum_2892 two component transcriptional regulator, winged helix family.
  
 
 
 0.789
Plim_2329
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: scl:sce7775 hypothetical protein.
 
 
 
 0.788
Plim_2761
Response regulator receiver.
 
   
 0.780
Plim_2762
PAS sensor protein.
 
 
 
0.776
Plim_3821
Response regulator receiver.
  
 
 
 0.770
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.