STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Plim_2163Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; KEGG: swi:Swit_1117 dienelactone hydrolase-like protein. (330 aa)    
Predicted Functional Partners:
Plim_3780
Hypothetical protein.
  
     0.595
Plim_0034
Biotin apo-protein ligase-related protein; KEGG: hypothetical protein.
  
     0.567
Plim_0655
PFAM: Pericardin like; KEGG: GI11778 gene product from transcript GI11778- RA.
  
     0.567
Plim_1563
PFAM: metallophosphoesterase; KEGG: mch:Mchl_2770 metallophosphoesterase.
  
     0.559
Plim_4083
Protein of unknown function DUF1559.
  
     0.557
Plim_2162
PFAM: SMP-30/Gluconolaconase/LRE domain protein; Arylesterase; putative esterase; KEGG: sus:Acid_3430 gluconolactonase.
     
 0.517
Plim_0607
Hypothetical protein; KEGG: GJ15014 gene product from transcript GJ15014- RA.
  
     0.480
Plim_2090
PFAM: protein of unknown function DUF1549; KEGG: sus:Acid_5709 hypothetical protein.
  
     0.477
Plim_2888
Hypothetical protein; KEGG: GK17577 gene product from transcript GK17577- RA.
  
     0.474
Plim_1957
TIGRFAM: heme-binding protein; PFAM: coagulation factor 5/8 type domain protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: msl:Msil_0148 putative glucose/sorbosone dehydrogenase.
  
     0.462
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.