STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Plim_2199PFAM: conserved hypothetical protein; KEGG: pag:PLES_49631 hypothetical protein. (184 aa)    
Predicted Functional Partners:
Plim_1570
KEGG: hch:HCH_05019 hypothetical protein.
 
     0.764
Plim_1090
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: ank:AnaeK_0302 AAA ATPase central domain protein.
    
 
 0.732
Plim_1844
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: ade:Adeh_0291 AAA ATPase.
    
 
 0.732
Plim_3041
AAA ATPase central domain protein; KEGG: acp:A2cp1_1568 response regulator receiver protein.
    
 
 0.732
Plim_3377
Appr-1-p processing domain protein.
 
     0.652
Plim_0509
KEGG: mxa:MXAN_7049 hypothetical protein.
  
     0.590
Plim_3716
UBA/THIF-type NAD/FAD binding protein; KEGG: proteophosphoglycan 5.
    
 0.550
Plim_2198
PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: sus:Acid_1518 oxidoreductase domain- containing protein.
       0.516
Plim_1779
PFAM: ATP-binding region ATPase domain protein; KEGG: mxa:MXAN_1393 ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein.
  
   
 0.498
Plim_1780
KEGG: mxa:MXAN_1392 hypothetical protein.
  
   
 0.491
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
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