STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Plim_2226PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bba:Bd1221 ABC-type dipeptide transport system, ATPase component; Belongs to the ABC transporter superfamily. (620 aa)    
Predicted Functional Partners:
Plim_1404
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sfu:Sfum_1413 binding-protein-dependent transport systems inner membrane component.
 0.999
Plim_1405
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sfu:Sfum_1414 binding-protein-dependent transport systems inner membrane component.
 0.999
Plim_1403
PFAM: extracellular solute-binding protein family 5; KEGG: sfu:Sfum_1411 extracellular solute-binding protein, family 5.
 
 0.986
Plim_1700
PFAM: extracellular solute-binding protein family 5.
  
 0.956
Plim_1012
PFAM: peptidase T2 asparaginase 2; KEGG: smt:Smal_0741 peptidase T2 asparaginase 2.
 
  
 0.745
Plim_1498
PFAM: phosphate acetyl/butaryl transferase; KEGG: mex:Mext_0052 phosphate butyryltransferase.
   
    0.400
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.