STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Plim_2242PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: hch:HCH_02597 thiol-disulfide isomerase and thioredoxins. (461 aa)    
Predicted Functional Partners:
Plim_0596
PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: aba:Acid345_0181 alkyl hydroperoxide reductase.
  
     0.735
Plim_0808
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: gme:Gmet_2723 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
  
 0.628
Plim_3989
Cytochrome c oxidase, subunit II.
    
 
 0.593
Plim_1552
PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thioredoxin domain; KEGG: aba:Acid345_3927 thioredoxin-like.
  
     0.554
Plim_2555
Tetratricopeptide TPR_2 repeat protein.
 
 
 0.514
Plim_2241
PFAM: iron dependent repressor; FeoA family protein; SMART: iron dependent repressor; KEGG: tcx:Tcr_0904 iron dependent repressor.
       0.508
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.495
Plim_0216
PFAM: protein of unknown function DUF420; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC; KEGG: sus:Acid_4378 hypothetical protein.
  
   0.453
Plim_1633
TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: scl:sce7636 thioredoxin-disulfide reductase.
   
 
 0.429
Plim_0535
PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: sus:Acid_6757 redoxin domain-containing protein.
  
   0.402
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.