Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Plim_2293TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mca:MCA1596 HlyD family multidrug efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (430 aa)    
Predicted Functional Partners:
Plim_2294
TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: noc:Noc_1827 hydrophobe/amphiphile efflux-1 HAE1; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
   0.908
Plim_2295
TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: noc:Noc_1827 hydrophobe/amphiphile efflux-1 HAE1; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
   0.884
Plim_2886
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.838
Plim_2851
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.828
Plim_2850
Outer membrane efflux protein.
  
   0.709
Plim_3437
Secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.605
Plim_0558
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: scl:sce1627 RND family efflux transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.555
Plim_1233
PFAM: acriflavin resistance protein; KEGG: sus:Acid_1579 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
   0.516
Plim_1232
PFAM: acriflavin resistance protein; KEGG: aba:Acid345_2830 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.502
Plim_1596
PFAM: secretion protein HlyD family protein; KEGG: sus:Acid_1656 RND family efflux transporter MFP subunit.
  
     0.491
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.