Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Plim_2397PFAM: Protein phosphatase 2C-like; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: pna:Pnap_3950 protein phosphatase 2C domain protein. (246 aa)    
Predicted Functional Partners:
Plim_3648
Serine/threonine protein kinase-related protein.
 
 
 0.942
Plim_0987
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; WD-40 repeat protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; WD-40 repeat protein; KEGG: sus:Acid_3680 serine/threonine protein kinase.
 
 
 0.941
Plim_3456
Serine/threonine protein kinase-related protein.
 
 
 0.903
Plim_0575
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; WD-40 repeat protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; WD-40 repeat protein; KEGG: hypothetical protein.
 
 
 0.897
Plim_1107
TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: glo:Glov_3612 sun protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
  
 0.881
Plim_3897
KEGG: hypothetical protein LOC100134320.
 
 
 0.846
Plim_2445
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; protein of unknown function DUF323; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: bha:BH2504 serine/threonine protein kinase.
 
 
 0.840
Plim_3668
Serine/threonine protein kinase-related protein; KEGG: Srrm2, Srrm2_predicted; serine/arginine repetitive matrix 2.
 
   0.817
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
   0.815
Plim_2753
Serine/threonine protein kinase-related protein.
  
   0.812
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
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