STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plim_2445PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; protein of unknown function DUF323; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: bha:BH2504 serine/threonine protein kinase. (896 aa)    
Predicted Functional Partners:
Plim_2087
PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: afw:Anae109_0777 protein phosphatase 2C-like protein.
 
 
 0.854
Plim_2397
PFAM: Protein phosphatase 2C-like; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: pna:Pnap_3950 protein phosphatase 2C domain protein.
 
 
 0.852
Plim_0575
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; WD-40 repeat protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; WD-40 repeat protein; KEGG: hypothetical protein.
 
  
0.504
Plim_3897
KEGG: hypothetical protein LOC100134320.
 
 
0.479
Plim_3629
Forkhead-associated protein.
 
 
   0.464
Plim_0878
PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: mxa:MXAN_2520 FHA domain/tetratricopeptide repeat protein.
 
 
   0.446
Plim_0237
PFAM: ATP-binding region ATPase domain protein; GAF domain protein; Forkhead-associated protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; Forkhead-associated protein; KEGG: scl:sce0793 two-component histidine kinase.
   
 
 0.442
Plim_0987
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; WD-40 repeat protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; WD-40 repeat protein; KEGG: sus:Acid_3680 serine/threonine protein kinase.
 
   
0.442
Plim_3456
Serine/threonine protein kinase-related protein.
 
   
0.441
Plim_3648
Serine/threonine protein kinase-related protein.
 
   
0.441
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
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