Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Plim_2527Dipeptidyl aminopeptidase/acylaminoacyl- peptidase-like protein; KEGG: pmr:PMI1215 hypothetical protein. (394 aa)    
Predicted Functional Partners:
Plim_0259
Hypothetical protein; KEGG: acp:A2cp1_0259 tetratricopeptide TPR_2 repeat protein.
  
     0.711
Plim_2846
Glycosyl hydrolase family 98 putative carbohydrate binding module.
  
    0.686
Plim_2494
PFAM: protein of unknown function DUF1552; KEGG: scl:sce0554 putative secreted protein.
  
     0.667
Plim_2485
PFAM: Protein of unknown function DUF1588; PA14 domain protein; Protein of unknown function DUF1592; SMART: PA14 domain protein; KEGG: scl:sce1022 hypothetical protein.
  
     0.662
Plim_0569
PFAM: protein of unknown function DUF1552; KEGG: sus:Acid_0842 hypothetical protein.
  
     0.605
Plim_0568
PFAM: Protein of unknown function DUF1592; Protein of unknown function DUF1588; Protein of unknown function DUF1587; Planctomycete cytochrome C; Protein of unknown function DUF1595; protein of unknown function DUF1585; KEGG: sus:Acid_4307 hypothetical protein.
  
     0.574
Plim_1693
PFAM: flagellar hook-associated 2 domain protein; flagellar hook-associated protein 2 domain protein; KEGG: dol:Dole_0612 hemolysin-type calcium-binding region.
  
     0.571
Plim_3167
Protein of unknown function DUF1080.
  
     0.547
Plim_2019
PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A2712 major facilitator transporter.
  
     0.540
Plim_3151
Protein of unknown function DUF303 acetylesterase putative; KEGG: proteophosphoglycan 5.
  
     0.527
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
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