STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Plim_2550PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; metalloenzyme domain protein; KEGG: hch:HCH_03222 hemopexin repeat-containing protein. (321 aa)    
Predicted Functional Partners:
Plim_1790
PFAM: metallophosphoesterase; KEGG: mxa:MXAN_2579 metallophosphoesterase/PKD domain protein.
  
 
   0.612
Plim_1563
PFAM: metallophosphoesterase; KEGG: mch:Mchl_2770 metallophosphoesterase.
  
 
   0.601
Plim_2865
Hypothetical protein.
 
      0.550
Plim_3114
Hypothetical protein; KEGG: bpm:BURPS1710b_A2370 200 kDa antigen p200, putative.
  
     0.505
Plim_0708
PFAM: putative esterase; KEGG: sus:Acid_2103 putative esterase.
  
     0.473
Plim_4107
Hypothetical protein.
  
     0.471
Plim_4083
Protein of unknown function DUF1559.
  
     0.457
Plim_3291
RecA-superfamily implicated in signal transduction ATPase-like protein.
  
     0.448
Plim_3672
Protein of unknown function DUF1080; KEGG: hypothetical protein LOC702215.
  
     0.439
Plim_3030
Dipeptidyl-peptidase IV.
  
     0.429
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.