Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Plim_2668Hypothetical protein. (677 aa)    
Predicted Functional Partners:
Plim_4107
Hypothetical protein.
  
     0.612
Plim_3780
Hypothetical protein.
 
     0.574
Fam139a
KEGG: fam139a; Protein FAM139A.
 
   
 0.571
Plim_2669
4Fe-4S ferredoxin iron-sulfur binding domain protein.
       0.527
Plim_3227
Inosine/uridine-preferring nucleoside hydrolase.
  
     0.519
Plim_4136
Hypothetical protein.
  
 
   0.516
Plim_1151
PFAM: protein of unknown function DUF1549; WD-40 repeat protein; SMART: WD-40 repeat protein; KEGG: sus:Acid_5709 hypothetical protein.
  
     0.512
Plim_3447
Glycosyl hydrolase BNR repeat-containing protein.
  
     0.494
Plim_1563
PFAM: metallophosphoesterase; KEGG: mch:Mchl_2770 metallophosphoesterase.
  
     0.482
Plim_0046
PFAM: protein of unknown function DUF1080; KEGG: sus:Acid_4919 hypothetical protein.
  
     0.476
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.