STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Plim_29121-alkyl-2-acetylglycerophosphocholine esterase. (268 aa)    
Predicted Functional Partners:
Plim_2416
Hypothetical protein; KEGG: sus:Acid_2651 putative O-antigen related protein.
 
     0.924
Plim_2636
Sialate O-acetylesterase.
  
     0.669
Plim_3419
Sulfatase; KEGG: hypothetical protein.
 
      0.578
Plim_2913
N-acetylglucosamine-6-phosphate deacetylase.
 
     0.528
Plim_2110
PFAM: Glycosyl transferase, family 31; glycosyl transferase family 2; KEGG: similar to beta-1,3-galactosyltransferase-6; K00734 galactosylxylosylprotein 3-beta- galactosyltransferase.
  
     0.519
Fam139a
KEGG: fam139a; Protein FAM139A.
  
     0.481
Plim_2720
Lipolytic protein G-D-S-L family.
  
     0.447
Plim_0594
PFAM: putative esterase; KEGG: sus:Acid_3430 gluconolactonase.
 
     0.438
Plim_1715
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aba:Acid345_3787 HAD-superfamily hydrolase subfamily IA, variant 3.
  
     0.432
Plim_0931
PFAM: Protein of unknown function DUF1592; Protein of unknown function DUF1588; Protein of unknown function DUF1587; Protein of unknown function DUF1595; protein of unknown function DUF1585; KEGG: sus:Acid_2097 hypothetical protein.
  
 
   0.430
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
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