STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Plim_3151Protein of unknown function DUF303 acetylesterase putative; KEGG: proteophosphoglycan 5. (1077 aa)    
Predicted Functional Partners:
Plim_0777
Hypothetical protein; KEGG: sus:Acid_1077 alpha/beta hydrolase domain- containing protein.
  
     0.760
Plim_2720
Lipolytic protein G-D-S-L family.
  
     0.727
Plim_3664
Hypothetical protein.
  
     0.685
Plim_0883
KEGG: sus:Acid_5331 hypothetical protein.
  
     0.655
Plim_2416
Hypothetical protein; KEGG: sus:Acid_2651 putative O-antigen related protein.
  
     0.630
Plim_1957
TIGRFAM: heme-binding protein; PFAM: coagulation factor 5/8 type domain protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: msl:Msil_0148 putative glucose/sorbosone dehydrogenase.
  
     0.611
Plim_3787
Hypothetical protein.
  
     0.589
Plim_1450
PFAM: protein of unknown function DUF1549; KEGG: sus:Acid_5039 hypothetical protein.
  
     0.565
Plim_1580
Large, multifunctional secreted protein.
  
     0.547
Plim_0665
Hypothetical protein; KEGG: pen:PSEEN1886 arylesterase.
  
     0.535
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.