STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Plim_3408KEGG: azo:azo2666 hypothetical protein. (621 aa)    
Predicted Functional Partners:
Plim_1306
PFAM: Forkhead-associated protein; KEGG: hypothetical protein; K03497 chromosome partitioning protein, ParB family.
  
     0.765
Plim_0839
ATPase-like protein involved in DNA repair; KEGG: liver stage antigen.
  
     0.752
Plim_2836
KEGG: hypothetical protein LOC714502.
  
     0.751
Plim_3846
Parallel beta-helix repeat protein; KEGG: hypothetical protein LOC100134400.
  
     0.722
Plim_0937
PFAM: YTV domain protein; KEGG: hypothetical protein LOC680468.
  
     0.719
Plim_2976
KEGG: bmn:BMA10247_2126 hypothetical protein.
  
     0.714
Plim_3354
TPR repeat-containing protein.
  
     0.708
Plim_1206
Hypothetical protein; KEGG: similar to Stretchin-Mlck CG18255-PA, isoform A.
  
     0.680
Plim_3628
FG-GAP repeat protein.
  
     0.663
Plim_4071
Spermine synthase.
  
     0.659
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.