Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Fam139a | Plim_3452 | Plim_2078 | Plim_3452 | KEGG: fam139a; Protein FAM139A. | Hypothetical protein. | 0.718 |
Plim_0167 | Plim_0839 | Plim_0167 | Plim_0839 | Hypothetical protein; KEGG: proteophosphoglycan ppg4. | ATPase-like protein involved in DNA repair; KEGG: liver stage antigen. | 0.423 |
Plim_0167 | Plim_1274 | Plim_0167 | Plim_1274 | Hypothetical protein; KEGG: proteophosphoglycan ppg4. | KEGG: scl:sce4409 hypothetical protein. | 0.661 |
Plim_0167 | Plim_3452 | Plim_0167 | Plim_3452 | Hypothetical protein; KEGG: proteophosphoglycan ppg4. | Hypothetical protein. | 0.735 |
Plim_0167 | Plim_4208 | Plim_0167 | Plim_4208 | Hypothetical protein; KEGG: proteophosphoglycan ppg4. | Tetratricopeptide TPR_2 repeat protein. | 0.456 |
Plim_0602 | Plim_3452 | Plim_0602 | Plim_3452 | PFAM: RNA polymerase alpha subunit domain protein; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dol:Dole_1087 TPR repeat-containing protein. | Hypothetical protein. | 0.933 |
Plim_0602 | alaS | Plim_0602 | Plim_2551 | PFAM: RNA polymerase alpha subunit domain protein; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dol:Dole_1087 TPR repeat-containing protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.869 |
Plim_0839 | Plim_0167 | Plim_0839 | Plim_0167 | ATPase-like protein involved in DNA repair; KEGG: liver stage antigen. | Hypothetical protein; KEGG: proteophosphoglycan ppg4. | 0.423 |
Plim_0839 | Plim_1274 | Plim_0839 | Plim_1274 | ATPase-like protein involved in DNA repair; KEGG: liver stage antigen. | KEGG: scl:sce4409 hypothetical protein. | 0.737 |
Plim_0839 | Plim_3452 | Plim_0839 | Plim_3452 | ATPase-like protein involved in DNA repair; KEGG: liver stage antigen. | Hypothetical protein. | 0.666 |
Plim_0839 | Plim_4208 | Plim_0839 | Plim_4208 | ATPase-like protein involved in DNA repair; KEGG: liver stage antigen. | Tetratricopeptide TPR_2 repeat protein. | 0.772 |
Plim_1274 | Plim_0167 | Plim_1274 | Plim_0167 | KEGG: scl:sce4409 hypothetical protein. | Hypothetical protein; KEGG: proteophosphoglycan ppg4. | 0.661 |
Plim_1274 | Plim_0839 | Plim_1274 | Plim_0839 | KEGG: scl:sce4409 hypothetical protein. | ATPase-like protein involved in DNA repair; KEGG: liver stage antigen. | 0.737 |
Plim_1274 | Plim_3452 | Plim_1274 | Plim_3452 | KEGG: scl:sce4409 hypothetical protein. | Hypothetical protein. | 0.737 |
Plim_1274 | Plim_4208 | Plim_1274 | Plim_4208 | KEGG: scl:sce4409 hypothetical protein. | Tetratricopeptide TPR_2 repeat protein. | 0.716 |
Plim_3449 | Plim_3450 | Plim_3449 | Plim_3450 | Hypothetical protein. | Protein of unknown function DUF1559. | 0.686 |
Plim_3449 | Plim_3451 | Plim_3449 | Plim_3451 | Hypothetical protein. | Hypothetical protein. | 0.686 |
Plim_3449 | Plim_3452 | Plim_3449 | Plim_3452 | Hypothetical protein. | Hypothetical protein. | 0.600 |
Plim_3450 | Plim_3449 | Plim_3450 | Plim_3449 | Protein of unknown function DUF1559. | Hypothetical protein. | 0.686 |
Plim_3450 | Plim_3451 | Plim_3450 | Plim_3451 | Protein of unknown function DUF1559. | Hypothetical protein. | 0.777 |
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