STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
msrAPeptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (184 aa)    
Predicted Functional Partners:
Plim_2822
methionine-R-sulfoxide reductase.
 
 0.992
Plim_3834
Putative GAF sensor protein; KEGG: GD15883 gene product from transcript GD15883- RA.
 
    
 0.733
Plim_2766
Ornithine carbamoyltransferase.
 
  
   0.707
Plim_2038
PFAM: Thioredoxin domain; KEGG: sfu:Sfum_2885 cytochrome c biogenesis protein, transmembrane region.
   
 
 0.698
Plim_0196
KEGG: sus:Acid_5380 hypothetical protein.
    
 
 0.652
Plim_0535
PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: sus:Acid_6757 redoxin domain-containing protein.
    
 
 0.652
Plim_1636
Thiol:disulfide interchange protein-like protein; KEGG: ank:AnaeK_0626 cytochrome c biogenesis protein transmembrane region.
    
 
 0.652
Plim_2909
Peroxiredoxin; Belongs to the glutathione peroxidase family.
  
 
 0.601
Plim_4099
NHL repeat containing protein.
   
 0.568
Plim_2467
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
  
 0.531
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
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