Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Plim_3666Glycerophosphoryl diester phosphodiesterase. (288 aa)    
Predicted Functional Partners:
Plim_1783
PFAM: Ethanolamine ammonia lyase large subunit; KEGG: rme:Rmet_5902 ethanolamine ammonia-lyase heavy chain.
     
  0.900
Plim_1784
PFAM: Ethanolamine ammonia-lyase light chain; KEGG: cvi:CV_1184 ethanolamine ammonia-lyase small subunit; Belongs to the EutC family.
     
  0.900
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.815
Plim_2265
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: bbt:BBta_7152 adenylate/guanylate cyclase.
    
 
 0.726
Plim_1895
TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: bca:BCE_A0165 MIP family channel protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.707
Plim_3713
Hypothetical protein.
    
   0.689
ppa
Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
     
 0.618
Plim_1537
TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3- phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: gur:Gura_2485 CDP-diacylglycerol--glycerol-3- phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 
 0.558
Plim_2369
PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; SMART: phospholipid/glycerol acyltransferase; KEGG: aba:Acid345_4052 2-acyl-glycerophospho- ethanolamine acyltransferase.
 
 
 0.539
Plim_1960
PFAM: FAD dependent oxidoreductase; KEGG: pfl:PFL_0533 oxidoreductase, FAD-binding.
  
 
 0.515
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
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