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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
Plim_3762MotA/TolQ/ExbB proton channel. (268 aa)    
Predicted Functional Partners:
Plim_1460
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: biopolymer transport protein ExbD/TolR.
  
 
 0.807
Plim_1696
PFAM: MotA/TolQ/ExbB proton channel; KEGG: bpt:Bpet2669 biopolymer transport protein.
  
     0.754
Plim_3761
Biopolymer transport protein ExbD/TolR.
  
   0.744
Plim_3760
Biopolymer transport protein ExbD/TolR.
  
   0.737
Plim_1698
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: amc:MADE_02811 biopolymer transport protein.
  
   0.719
Plim_3132
Biopolymer transport protein ExbD/TolR.
 
   0.691
Plim_1126
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hip:CGSHiEE_06305 ABC transporter ATP-binding protein.
  
   
 0.644
Plim_0943
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
     0.600
Plim_0918
acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
   
 0.591
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
 
     0.590
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
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