Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Plim_3878Glycosyltransferase-like protein; KEGG: proteophosphoglycan ppg4. (522 aa)    
Predicted Functional Partners:
Plim_3877
Glycosyl transferase family 2; KEGG: hypothetical protein LOC100150481.
       0.782
Plim_3880
Glycosyl transferase group 1; KEGG: proteophosphoglycan 5.
 
     0.765
Plim_3885
O-antigen polymerase; KEGG: proteophosphoglycan ppg4.
 
    0.669
Plim_3669
Polysaccharide biosynthesis protein.
 
    0.631
Plim_3879
Polysaccharide deacetylase.
       0.613
Plim_3884
Hypothetical protein; KEGG: proteophosphoglycan ppg4.
 
     0.553
Plim_1055
PFAM: glycosyl transferase family 2; Methyltransferase type 12; Methyltransferase type 11; TPR repeat-containing protein; Methionine biosynthesis MetW protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gbm:Gbem_3740 glycosyl transferase family 2.
  
 
 0.539
Plim_3883
Glycosyl transferase group 1; KEGG: proteophosphoglycan ppg4.
 
     0.537
Plim_3354
TPR repeat-containing protein.
  
     0.524
Plim_1803
TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF1550; KEGG: afw:Anae109_4420 hypothetical protein.
  
     0.522
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.