STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plim_3931Sulfite oxidase. (407 aa)    
Predicted Functional Partners:
Plim_2817
Rhodanese domain protein.
    
 0.920
Plim_1772
PFAM: ATP-sulfurylase; KEGG: sulfate adenylyltransferase; K00958 sulfate adenylyltransferase.
     
 0.914
Plim_0369
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite.
     
 0.913
Plim_2758
Sulfite reductase (NADPH); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
   
 
 0.912
msrQ
Oxidoreductase FAD-binding domain protein; Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of [...]
  
  
 0.906
Plim_3056
FAD-binding domain protein.
     
 0.904
cysA
Sulfate ABC transporter, ATPase subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
    
  0.901
Plim_3184
Sulfate ABC transporter, inner membrane subunit CysW.
     
  0.900
Plim_3185
Sulfate ABC transporter, inner membrane subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.
    
  0.900
Plim_3186
Sulfate ABC transporter, periplasmic sulfate- binding protein.
     
  0.900
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
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