STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Plim_4116Oxidoreductase domain protein. (373 aa)    
Predicted Functional Partners:
Plim_3765
Oxidoreductase domain protein; KEGG: Hypothetical protein CBG16424.
  
     0.764
Plim_1865
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rde:RD1_3876 oxidoreductase, putative.
  
     0.737
Plim_3234
Oxidoreductase domain protein.
  
     0.722
Plim_2348
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bra:BRADO0445 putative oxidoreductase/dehydrogenase protein.
  
     0.602
Plim_1532
PFAM: oxidoreductase domain protein; KEGG: sus:Acid_3331 oxidoreductase domain- containing protein.
  
     0.551
Plim_3510
Oxidoreductase domain protein.
  
     0.528
Plim_4115
HAD-superfamily hydrolase, subfamily IA, variant 1.
 
     0.507
Plim_3924
Oxidoreductase domain protein.
  
     0.472
Plim_0917
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pca:Pcar_1256 dehydrogenase.
  
     0.467
Plim_2802
Oxidoreductase domain protein.
  
     0.458
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.