STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plim_4129N-acetylmuramoyl-L-alanine amidase family 2. (406 aa)    
Predicted Functional Partners:
Plim_4130
Hypothetical protein.
       0.814
Plim_4128
Hypothetical protein.
       0.565
Plim_4131
Conserved hypothetical protein.
       0.493
Plim_2836
KEGG: hypothetical protein LOC714502.
  
     0.471
Plim_1210
TIGRFAM: conserved repeat domain protein; KEGG: conserved repeat domain precursor.
  
     0.440
Plim_3884
Hypothetical protein; KEGG: proteophosphoglycan ppg4.
  
     0.439
Plim_2730
Glucosamine/galactosamine-6-phosphate isomerase.
  
     0.434
Plim_3647
Hypothetical protein.
  
     0.426
Plim_3798
Hypothetical protein.
  
     0.415
Plim_4127
Hypothetical protein; KEGG: kinesin K39.
       0.405
Your Current Organism:
Planctopirus limnophila
NCBI taxonomy Id: 521674
Other names: P. limnophila DSM 3776, Planctomyces limnophilus ATCC 43296, Planctomyces limnophilus DSM 3776, Planctomyces limnophilus str. DSM 3776, Planctomyces limnophilus strain DSM 3776, Planctopirus limnophila DSM 3776, Planctopirus limnophilus DSM 3776
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.