STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M231_06910Oligopeptide transporter 8. (727 aa)    
Predicted Functional Partners:
M231_08037
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
 
      0.707
M231_00554
Uncharacterized protein.
 
      0.633
M231_07712
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
   
 0.616
M231_02115
U3 small nucleolar RNA-associated protein 15.
 
 
    0.511
M231_06627
Aquaporin rerated protein, other eukaryote; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.465
M231_01855
Sterol-binding protein.
   
  
 0.446
M231_00560
Uncharacterized protein.
      0.445
M231_06749
Multifunctional beta-oxidation protein.
   
  
 0.425
M231_00908
Carboxymethylenebutenolidase.
 
      0.417
M231_00802
Protein arginine N-methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
 
  
 
 0.404
Your Current Organism:
Tremella mesenterica
NCBI taxonomy Id: 5217
Other names: CBS 6973, T. mesenterica
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